Gene | Rbm3 |
Chromosome | X |
Deletion Start | 8,141,595 |
Deletion End | 8,139,804 |
Deletion Size | 1,792 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome X
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 8,144,615 | 8,144,636 | TGGCTTCATCACCTTCACAAAC |
TUP | 8,144,589 | 8,144,614 | CCAGAGCATGCCTCAGATGCGATGAG |
TUR | 8,144,565 | 8,144,586 | GGCCTCACCTCTCCATTCATAG |
TDF | 8,144,085 | 8,144,104 | TTCTGGTCAGCGGAGCTTGG |
TDP | 8,144,059 | 8,144,082 | TGGACGAGGCACCCAGAATTTGGT |
TDR | 8,144,006 | 8,144,025 | GAATGGGCACAGGCAGGTAG |
PCR Primers
Primer | Sequence |
SU | CATGCGCGATAGGAGTCATC |
SD | TTCAACTAGCTCTGGCATGC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 72 bp | + | + | - |
TDF | TDR | 99 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
11935A-A12 | VGB6 | C57BL/6NTac | |
11935A-C6 | VGB6 | C57BL/6NTac | |
11935A-G6 | VGB6 | C57BL/6NTac | |