11948   Mafg     Status: ES cell colonies screened / QC positives

GeneMafg
Chromosome11
Deletion Start120,632,629
Deletion End120,632,052
Deletion Size578
Genome Build38
MGI IDMGI:96911
NCBI Gene ID17134
BAC ID179F3
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 11

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF120,629,731120,629,749TGTGCCACTCCAGGTGAAG
TUP120,629,706120,629,726AGCCAGGCGAGAATGGCACCA
TUR120,629,666120,629,685TCTCGCACCGACATGGTTAC
TDF120,629,497120,629,516TCCAGCAGGAGGTGGAGAAG
TDP120,629,475120,629,496CTGGCCTCGGAGAATGCCAGCA
TDR120,629,410120,629,428CACGGTCCTGGCAAAGTTC

PCR Primers

PrimerSequence
SUCTTCTAATCTCTCTCTGCTC
SDGCACGGCCTTGGTACAAAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR84 bp++-
TDFTDR107 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11948A-H5VGB6C57BL/6NTac
11948A-C8VGB6C57BL/6NTac
11948A-C10VGB6C57BL/6NTac
11948A-F9VGB6C57BL/6NTac
11948A-H6VGB6C57BL/6NTac
11948A-D12VGB6C57BL/6NTac