Gene | Mafg |
Chromosome | 11 |
Deletion Start | 120,632,629 |
Deletion End | 120,632,052 |
Deletion Size | 578 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 120,629,731 | 120,629,749 | TGTGCCACTCCAGGTGAAG |
TUP | 120,629,706 | 120,629,726 | AGCCAGGCGAGAATGGCACCA |
TUR | 120,629,666 | 120,629,685 | TCTCGCACCGACATGGTTAC |
TDF | 120,629,497 | 120,629,516 | TCCAGCAGGAGGTGGAGAAG |
TDP | 120,629,475 | 120,629,496 | CTGGCCTCGGAGAATGCCAGCA |
TDR | 120,629,410 | 120,629,428 | CACGGTCCTGGCAAAGTTC |
PCR Primers
Primer | Sequence |
SU | CTTCTAATCTCTCTCTGCTC |
SD | GCACGGCCTTGGTACAAAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 84 bp | + | + | - |
TDF | TDR | 107 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
11948A-H5 | VGB6 | C57BL/6NTac | |
11948A-C8 | VGB6 | C57BL/6NTac | |
11948A-C10 | VGB6 | C57BL/6NTac | |
11948A-F9 | VGB6 | C57BL/6NTac | |
11948A-H6 | VGB6 | C57BL/6NTac | |
11948A-D12 | VGB6 | C57BL/6NTac | |