11966   Syf2     Status: ES cell colonies screened / QC positives

GeneSyf2
Chromosome4
Deletion Start134,930,998
Deletion End134,937,026
Deletion Size6,029
Genome Build38
MGI IDMGI:1915842
NCBI Gene ID68592
BAC ID67O23
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 4

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF134,931,647134,931,670CCCATCTCTTGTTTGGATGTCTAC
TUP134,931,671134,931,694TCAAATCGTAAGCATGGCTGGCGA
TUR134,931,753134,931,773GGGTCAGATGACCAAGCAGTC
TDF134,936,848134,936,871AGCGAGACAAATACAGCCGAAGAC
TDP134,936,873134,936,899CCCGTACAATGATGATGCCGACATCGA
TDR134,936,906134,936,927GAACTTGGCGTTCCTCTCATTG

PCR Primers

PrimerSequence
SUTCTTTAGAGCTGGTGACAGG
SDCACCCGTGTACATCTAAGC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR127 bp++-
TDFTDR80 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11966A-E3VGB6C57BL/6NTac
11966B-C7VGB6C57BL/6NTac
11966B-D11VGB6C57BL/6NTac
11966B-E7VGB6C57BL/6NTac
11966B-H4VGB6C57BL/6NTac
11966B-G7VGB6C57BL/6NTac
11966C-F2VGB6C57BL/6NTac