11973   Pkp2     Status: ES cell colonies screened / QC positives

GenePkp2
Chromosome16
Deletion Start16,213,376
Deletion End16,240,704
Deletion Size27,329
Genome Build38
MGI IDMGI:1914701
NCBI Gene ID67451
BAC ID258M14
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 16

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF16,214,01516,214,034CAAGTGCTCCACTCCGTATC
TUP16,214,03516,214,062TGCGACTAAACAAATTGAGCAAGTCGGC
TUR16,214,08316,214,103CTTATCCTCCGCAGGGTGTTC
TDF16,240,52616,240,550GCTTCTACAACTGCTCAAACTTCAG
TDP16,240,55116,240,577AACGAAGATGTTCAACGGGCTGCTTGT
TDR16,240,63016,240,651CGAGGCACTCCATTCAGTTCAG

PCR Primers

PrimerSequence
SUTGCTACTCACAGCAGAAGTTC
SDCGCATGCTCAAACCAAAAGG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR89 bp++-
TDFTDR126 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11973C-B11VGB6C57BL/6NTac
11973C-C10VGB6C57BL/6NTac
11973B-D3VGB6C57BL/6NTac
11973B-E2VGB6C57BL/6NTac
11973C-D11VGB6C57BL/6NTac
11973C-F5VGB6C57BL/6NTac