11975   Aldoc     Status: ES cell colonies screened / QC positives

GeneAldoc
Chromosome11
Deletion Start78,324,405
Deletion End78,326,357
Deletion Size1,953
Genome Build38
MGI IDMGI:101863
NCBI Gene ID11676
BAC ID362E3
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 11

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF78,325,27378,325,294GGCTTTCTCCCATCCTATCTTC
TUP78,325,29678,325,322ACTTCTTCCAGTTAACCCTGCTCTTGC
TUR78,325,35478,325,374CTCCGTCAGGCAGAATCTCAG
TDF78,326,19778,326,215GCAGCGTGCATTCCACATC
TDP78,326,21678,326,238CGTGGTCTGGCTCAGTCTGCTCA
TDR78,326,25978,326,278GCTGCAAGCCCGTTCATCTG

PCR Primers

PrimerSequence
SUACCTGGCAGCAGTTTCCAG
SDCTATACCATCAAGGGTAACTG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR102 bp++-
TDFTDR82 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
11975A-B1VGB6C57BL/6NTac
11975A-C6VGB6C57BL/6NTac
11975A-D3VGB6C57BL/6NTac
11975A-D4VGB6C57BL/6NTac
11975A-D5VGB6C57BL/6NTac
11975A-E5VGB6C57BL/6NTac