11979 Scn1a Status: Cancelled
| Gene | Scn1a |
| Chromosome | 2 |
| Deletion Start | 66,351,174 |
| Deletion End | 66,324,608 |
| Deletion Size | 26,567 |
| Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | | | CAGGACCTGACAGCTTCAAC |
| TUP | | | TCTTCACCAGAGAATCCCTTGCAGC |
| TUR | | | CTCTTCTGCAATGCGCCTTTC |
| TDF | | | GAGAGCGACGCAACAGTAAC |
| TDP | | | TGAGCCAGACCAGCAGGTCCTC |
| TDR | | | TCCCATTGGCTGGAAACAC |
PCR Primers
| Primer | Sequence |
| SU | TGATCTATCAGTGGGCATCG |
| SD | ATTCGGTATGGGTACATAGC |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | bp | - | + | + |
| NeoFwd | SD | bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
