12000 B3gnt4 Status: Cancelled
Gene | B3gnt4 |
Chromosome | 5 |
Deletion Start | 123,510,577 |
Deletion End | 123,511,645 |
Deletion Size | 1,069 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 5
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 123,510,776 | 123,510,798 | GCCTCTTCTTAACCTATCGACAC |
TUP | 123,510,799 | 123,510,824 | TGCCGAAACTTCTCCATCTTGCTGGA |
TUR | 123,510,864 | 123,510,884 | TGAGCAGGCTGTGACTTGATG |
TDF | 123,511,221 | 123,511,242 | AGTGGGAGATGTCATTCGCTTG |
TDP | 123,511,245 | 123,511,266 | CCGGCCCAACAGGAACACCAAA |
TDR | 123,511,305 | 123,511,326 | TCCTGCATAAGGTGGGTAGTGG |
PCR Primers
Primer | Sequence |
SU | GATAGCTACAAGCCACATGG |
SD | GTGAGTCTTCAGGCTGTCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 109 bp | + | + | - |
TDF | TDR | 106 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |