12050   Calcoco2     Status: ES cell colonies screened / QC positives

GeneCalcoco2
Chromosome11
Deletion Start96,107,592
Deletion End96,099,913
Deletion Size7,680
Genome Build38
MGI IDMGI:1343177
NCBI Gene ID76815
BAC ID73J11
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 11

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF96,106,66296,106,685TGCAAGCAGGACTTAGTAAGATGG
TUP96,106,63696,106,660TGAACCTTAGAGTTTTGATAGCTTT
TUR96,106,60896,106,630AGGAGATCCTGTCTGGACCCTTC
TDF96,100,89196,100,910AGCTGTCACCGTGGACACTG
TDP96,100,86396,100,888CACTAGAAGCAGAGCCTGCAAGAGCA
TDR96,100,82696,100,848CAACAGGCATCCAAGGACTAGAG

PCR Primers

PrimerSequence
SUCTAGTGTGGGAAGGCAGTGG
SDTGAGTCCTTTTGAGACAGGG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR78 bp++-
TDFTDR85 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
12050A-C2VGB6C57BL/6NTac
12050A-D4VGB6C57BL/6NTac
12050A-F7VGB6C57BL/6NTac
12050A-E5VGB6C57BL/6NTac