12073   Aifm3     Status: ES cell colonies screened / QC positives

GeneAifm3
Chromosome16
Deletion Start17,492,076
Deletion End17,507,243
Deletion Size15,168
Genome Build38
MGI IDMGI:1919418
NCBI Gene ID72168
BAC ID363D3
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 16

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF17,492,46617,492,484TGCCCTCTTAGGGTGACTG
TUP17,492,48517,492,512ACAGGGTATCATGGACAGGTCCCTACTC
TUR17,492,54717,492,569ACAGGAGATGAGGCCCAGAGAAG
TDF17,507,09017,507,108TCTTCTGCCCTGACCCATC
TDP17,507,11017,507,134TCCTCTCATTCCTGCAGAACCGGTG
TDR17,507,16817,507,188CCCAAGTCCACCACAGGAGAG

PCR Primers

PrimerSequence
SUGAGCACAGAGGGTCTCCAAC
SDAAGTGTCGGCCCAATTACAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR104 bp++-
TDFTDR99 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
12073A-H9VGB6C57BL/6NTac
12073A-H3VGB6C57BL/6NTac
12073A-G12VGB6C57BL/6NTac
12073A-B10VGB6C57BL/6NTac