12074   Gdnf     Status: ES cell colonies screened / QC positives

GeneGdnf
Chromosome15
Deletion Start7,811,057
Deletion End7,834,867
Deletion Size23,811
Genome Build38
MGI IDMGI:107430
NCBI Gene ID14573
BAC ID422H12
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 15

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF7,811,9067,811,929GGGAGTAGGAAGGCACTTTAACAG
TUP7,811,9327,811,954TCCTCCCTGCTTGCAATCTTGCC
TUR7,812,0097,812,027TGGCGAACTCAGGGCTAAG
TDF7,834,2597,834,279GGGTCGGATTCTAGCGAGTTC
TDP7,834,2807,834,307CCGTGACTTAGAAGACTGCCCGAAATGA
TDR7,834,3437,834,365AATCTTCAGGCATATTGGCTGTC

PCR Primers

PrimerSequence
SUTTTGACGTGGTGTCTCGTTC
SDGAATCGTCACATTTCCCTGG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR122 bp++-
TDFTDR107 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
12074A-C7VGB6C57BL/6NTac
12074B-F4VGB6C57BL/6NTac
12074B-D12VGB6C57BL/6NTac