Gene | 8030474K03Rik |
Chromosome | X |
Deletion Start | 101,794,757 |
Deletion End | 101,798,126 |
Deletion Size | 3,370 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome X
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 101,795,572 | 101,795,592 | TGTACTGTCCAGTGCTACCTG |
TUP | 101,795,596 | 101,795,619 | AGTCAGCTCAGGCATGGAAAGGCA |
TUR | 101,795,630 | 101,795,650 | AGCCAAAGAGCTTTCCTGTTC |
TDF | 101,797,155 | 101,797,173 | CCTGCAAACTGACCTCCTC |
TDP | 101,797,174 | 101,797,202 | TCAGATGCTGGATTAGGTTGTACCAAGCA |
TDR | 101,797,211 | 101,797,231 | GCTTTGAGCCTTGCTTTCCTG |
PCR Primers
Primer | Sequence |
SU | AAGTCTCGCGAGACTTCGC |
SD | ATAGGACACTCACTTCAAGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 79 bp | + | + | - |
TDF | TDR | 77 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12083A-C12 | VGB6 | C57BL/6NTac | |
12083A-D1 | VGB6 | C57BL/6NTac | |
12083A-G3 | VGB6 | C57BL/6NTac | |
12083A-H2 | VGB6 | C57BL/6NTac | |