12118   Lst1     Status: ES cell colonies screened / QC positives

GeneLst1
Chromosome17
Deletion Start35,188,394
Deletion End35,185,154
Deletion Size3,241
Genome Build38
MGI IDMGI:1096324
NCBI Gene ID16988
BAC ID304L1
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 17

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF35,188,20535,188,225ACCCGGAAACAGTAGGGAGTG
TUP35,188,16935,188,197TCAGGAGAGGTAACCCGGTAGGTGAATCT
TUR35,188,13935,188,159ACCCAGACTTCAACTTCTCAC
TDF35,186,08835,186,108GTCCTTATCCAGCGGGTGTAG
TDP35,186,06235,186,084TGTGTTTGATTCCCAGCGCAGCA
TDR35,186,01535,186,037CCTGCCTCTATGTGGGATTTCAG

PCR Primers

PrimerSequence
SUCTGGTCTACAGAGTGAGTTC
SDAGGCCAACAATAAGTCCTTAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR87 bp++-
TDFTDR94 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
12118A-A9VGB6C57BL/6NTac
12118A-B1VGB6C57BL/6NTac
12118A-C1VGB6C57BL/6NTac
12118A-H2VGB6C57BL/6NTac