Gene | Zfp597 |
Chromosome | 16 |
Deletion Start | 3,872,088 |
Deletion End | 3,865,611 |
Deletion Size | 6,478 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 16
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 3,871,923 | 3,871,946 | GGCTTACCGACTTCCTCATTTCAG |
TUP | 3,871,895 | 3,871,921 | ATCATCAGGTGGAGGAGAGCCCTAGCA |
TUR | 3,871,841 | 3,871,862 | GCCATTTGGAGACGCATTTCAG |
TDF | 3,866,290 | 3,866,309 | CCGAACCAACCTGAGGACAC |
TDP | 3,866,262 | 3,866,288 | TAAGCGAATCCACACTGGTGAGAAGCC |
TDR | 3,866,231 | 3,866,248 | GAAGCTGGCAGCACACTC |
PCR Primers
Primer | Sequence |
SU | CAATCAGGATGCAGGATGG |
SD | TATATCATGTAATAGGACTGGC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 106 bp | + | + | - |
TDF | TDR | 79 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12188A-A4 | VGB6 | C57BL/6NTac | |
12188A-B3 | VGB6 | C57BL/6NTac | |
12188A-H2 | VGB6 | C57BL/6NTac | |
12188A-D3 | VGB6 | C57BL/6NTac | |
12188A-G4 | VGB6 | C57BL/6NTac | |
12188A-C3 | VGB6 | C57BL/6NTac | |