12199   Rnf181     Status: ES cell colonies screened / QC positives

GeneRnf181
Chromosome6
Deletion Start72,362,362
Deletion End72,360,564
Deletion Size1,799
Genome Build38
MGI IDMGI:1913760
NCBI Gene ID66510
BAC ID259O9
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 6

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF72,362,15972,362,176TCAGGGCGACGCGATTAG
TUP72,362,13472,362,158TCGAGTCGGAGTCGTTAATTTGGGC
TUR72,362,07072,362,090GCTACACCCACCCTTTCTATC
TDF72,360,97972,360,998GGAAGGCAGGAGCAGGAAAG
TDP72,360,94772,360,976CCGGAATACCGCTCTTGATTTCTCTAGACA
TDR72,360,91872,360,936AGCTCATGGCGGCACAGAG

PCR Primers

PrimerSequence
SUGCAGGTAAACTCAGCCAAGG
SDAGAACACTCAGACCCAAGCC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR107 bp++-
TDFTDR81 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
12199B-B6VGB6C57BL/6NTac
12199B-H7VGB6C57BL/6NTac
12199B-C3VGB6C57BL/6NTac
12199B-F8VGB6C57BL/6NTac
12199B-D10VGB6C57BL/6NTac