Gene | Gpr17 |
Chromosome | 18 |
Deletion Start | 31,948,005 |
Deletion End | 31,946,973 |
Deletion Size | 1,033 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 18
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 31,947,880 | 31,947,903 | TGCTTCTACCTTCTGGACTTCATC |
TUP | 31,947,850 | 31,947,869 | TGGGCAATGCTCTGGCCCTG |
TUR | 31,947,813 | 31,947,831 | CCGGAGTGCCTGACTTGTG |
TDF | 31,947,445 | 31,947,464 | TGCAACTGTACCGGGAGAAG |
TDP | 31,947,418 | 31,947,439 | CCATCACGCCCTGGCATCCCTG |
TDR | 31,947,376 | 31,947,394 | GCAGGTGACCGTGGTGATG |
PCR Primers
Primer | Sequence |
SU | GCACTAACTCCACCCTCTCG |
SD | GGGAGCTGTACAGAAGCCAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 91 bp | + | + | - |
TDF | TDR | 89 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12229B-B5 | VGB6 | C57BL/6NTac | |
12229B-C3 | VGB6 | C57BL/6NTac | |
12229E-A3 | VGB6 | C57BL/6NTac | |
12229E-D3 | VGB6 | C57BL/6NTac | |
12229E-G8 | VGB6 | C57BL/6NTac | |
12229E-F3 | VGB6 | C57BL/6NTac | |
12229E-F1 | VGB6 | C57BL/6NTac | |