12494   Akr1d1     Status: ES cell colonies screened / QC positives

GeneAkr1d1
Chromosome6
Deletion Start37,530,248
Deletion End37,558,531
Deletion Size28,284
Genome Build38
MGI IDMGI:2384785
NCBI Gene ID208665
BAC ID89J9
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 6

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF37,530,76337,530,787ATGGTTGTTTCCCTGAGTTGCTTTG
TUP37,530,79037,530,817CCTGTGGTAATGCTGACTCTCAAGGTGG
TUR37,530,81937,530,840CCCTTGTTGCTTCACGATGTTC
TDF37,557,54537,557,568TGACATCGTCATTGTCGCACATAG
TDP37,557,57037,557,591CCCTTAGGGACCTGCCGCAACC
TDR37,557,63137,557,652TTTCTGCCCTGTCCTCATAGAG

PCR Primers

PrimerSequence
SUTGCCTAGAGTTTTCAGAGAGATTG
SDGAGCAGTGGAAACAGCCAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR78 bp++-
TDFTDR108 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
12494A-B10VGB6C57BL/6NTac
12494A-D1VGB6C57BL/6NTac
12494A-F11VGB6C57BL/6NTac