12638   Fam198b     Status: ES cell colonies screened / QC positives

GeneFam198b
Chromosome3
Deletion Start79,886,230
Deletion End79,908,799
Deletion Size22,570
Genome Build38
MGI IDMGI:1915909
NCBI Gene ID73663
BAC ID169J15
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 3

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF79,886,50479,886,522CAGAGTTGCAGGGCAATGG
TUP79,886,52379,886,546AAGCACTTTGCAGCCCAACGTGGT
TUR79,886,56279,886,580AGGCTTGCTGCGCTTGGAG
TDF79,908,59379,908,612CCGACCTCGCCCTATCATTC
TDP79,908,61379,908,639TCTGGGACTCATCTCTAGCATCTGCAA
TDR79,908,70179,908,719GCCATTCAGCCAGCACTTC

PCR Primers

PrimerSequence
SUGAAGGAAAGGGTTACTCGCC
SDAGACGGTGACTAAGCTAGTG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR77 bp++-
TDFTDR127 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
12638A-B2VGB6C57BL/6NTac
12638A-C10VGB6C57BL/6NTac
12638A-C4VGB6C57BL/6NTac
12638A-H10VGB6C57BL/6NTac