12743   Iqub     Status: ES cell colonies screened / QC positives

GeneIqub
Chromosome6
Deletion Start24,505,904
Deletion End24,479,151
Deletion Size26,754
Genome Build38
MGI IDMGI:3041159
NCBI Gene ID214704
BAC ID59M23
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 6

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF24,505,77524,505,795TGCCAGAGCAAGACGATGAAG
TUP24,505,75224,505,774TGCAGGAACTCACCACCGAGAGC
TUR24,505,73224,505,751TGCCTCTCCACGTTCTCCTC
TDF24,479,50224,479,526CCCATGTTTGATTTCCAGGATTCAC
TDP24,479,45824,479,487AGTCACTGATAGTTTCGGCTCCAGATGAGA
TDR24,479,43924,479,457CCCTTGGAGGCCAGATGTG

PCR Primers

PrimerSequence
SUGAAGGCTGTATGCCTCAGTG
SDTACTTTGTACACTATCAGAGTG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR64 bp++-
TDFTDR88 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
12743A-D2VGB6C57BL/6NTac
12743A-D3VGB6C57BL/6NTac
12743A-E7VGB6C57BL/6NTac