12764   Sds     Status: ES cell colonies screened / QC positives

GeneSds
Chromosome5
Deletion Start120,479,084
Deletion End120,483,854
Deletion Size4,771
Genome Build38
MGI IDMGI:98270
NCBI Gene ID231691
BAC ID222P3
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 5

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF120,479,211120,479,230GCATTGGGCATCTCTGCAAG
TUP120,479,231120,479,255ATGGTACAAGGCAGGGTGGCATCCT
TUR120,479,286120,479,304GCACACCTGCCTCTACAAC
TDF120,482,898120,482,919GCATTTGAGTCAGGCCAGTTTG
TDP120,482,921120,482,945TGCCCTAGACCACTGTGCAGGATCC
TDR120,482,987120,483,005GCATGTGAGAGGTGAGGAC

PCR Primers

PrimerSequence
SUTTGTGTCTGCTGACGTGCTC
SDCCACCCTAGATCCCTGTGTG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR94 bp++-
TDFTDR108 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
12764A-C9VGB6C57BL/6NTac
12764A-D5VGB6C57BL/6NTac
12764A-E8VGB6C57BL/6NTac
12764A-F5VGB6C57BL/6NTac