12782   Ifnb1     Status: ES cell clone microinjected

GeneIfnb1
Chromosome4
Deletion Start88,522,771
Deletion End88,522,192
Deletion Size580
Genome Build38
MGI IDMGI:107657
NCBI Gene ID15977
BAC ID95A18
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 4

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF88,522,60488,522,622CACCTACAGGGCGGACTTC
TUP88,522,57288,522,599TCCCTATGGAGATGACGGAGAAGATGCA
TUR88,522,54588,522,562TGGATGGCAAAGGCAGTG
TDF88,522,36488,522,383TGTCCTCAACTGCTCTCCAC
TDP88,522,33088,522,359AGAGCTATTACTGGAGGGTGCAAAGGTACC
TDR88,522,29888,522,319CCAGGCGTAGCTGTTGTACTTC

PCR Primers

PrimerSequence
SUTCCAGCAATTGGTGAAACTG
SDGCTTTAGAGCCACCTGCTTG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR78 bp++-
TDFTDR86 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
12782A-C6VGB6C57BL/6NTac
12782A-C11VGB6C57BL/6NTac
12782A-D4VGB6C57BL/6NTac