Gene | Neurog1 |
Chromosome | 13 |
Deletion Start | 56,251,929 |
Deletion End | 56,251,102 |
Deletion Size | 828 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 13
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 56,251,641 | 56,251,660 | GAGGAGTCGTCGCGTCAAAG |
TUP | 56,251,620 | 56,251,640 | CCAACGATCGCGAGCGCAACC |
TUR | 56,251,523 | 56,251,543 | AAGCGCAGCGTCTCAATCTTG |
TDF | 56,251,239 | 56,251,256 | TTCCTGGCCTGCCCAAAG |
TDP | 56,251,218 | 56,251,237 | CCTGCTCCACACGACGCCCT |
TDR | 56,251,195 | 56,251,217 | GGCCTAGTGGTATGGGATGAAAC |
PCR Primers
Primer | Sequence |
SU | AAATTATGCAAATAGCAGGCG |
SD | ATCCATAATGCATGAAGCCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 138 bp | + | + | - |
TDF | TDR | 62 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12800A-A10 | VGB6 | C57BL/6NTac | |
12800A-C3 | VGB6 | C57BL/6NTac | |
12800A-D8 | VGB6 | C57BL/6NTac | |