12818   Endog     Status: ES cell colonies screened / QC positives

GeneEndog
Chromosome2
Deletion Start30,171,578
Deletion End30,174,066
Deletion Size2,489
Genome Build38
MGI IDMGI:1261433
NCBI Gene ID13804
BAC ID269G13
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 2

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF30,172,35930,172,380CAGCAGGGTCTTGATTGTGAAG
TUP30,172,38230,172,403AGGTTCCTGGGACATCCACCCA
TUR30,172,40730,172,428TGGTCTCCTGTCCATCTCCATC
TDF30,173,09030,173,109CCACGTCTGACCTGCCTTAC
TDP30,173,11130,173,133ACCTGTAACCCGTGGCTGCACGG
TDR30,173,16630,173,187GCTCATTTGTCTGCCAGGAATC

PCR Primers

PrimerSequence
SUACATACTTCCCAGGCCAAAC
SDCACCCATCCTGGAGACTAGC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR70 bp++-
TDFTDR98 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
12818A-E1VGB6C57BL/6NTac
12818A-F4VGB6C57BL/6NTac
12818A-E5VGB6C57BL/6NTac