12822   Foxq1     Status: ES cell colonies screened / QC positives

GeneFoxq1
Chromosome13
Deletion Start31,558,920
Deletion End31,560,187
Deletion Size1,268
Genome Build38
MGI IDMGI:1298228
NCBI Gene ID15220
BAC ID76A10
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 13

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF31,558,98931,559,007AGCAGCGACGTGCCATCTC
TUP31,559,00931,559,031ACTGTCCGCGGCTGGTGACGACT
TUR31,559,04931,559,066GCTGTTGGCTGCACAGTC
TDF31,559,86631,559,885TGCTACCGCTCTGTGCTTAC
TDP31,559,88831,559,908CGCAAGCGAGCCTACGCTGCT
TDR31,559,98131,559,999CGGACCTCGGAATGGCTTG

PCR Primers

PrimerSequence
SUCTCAAAGTCTCTAAACCTCG
SDACACACATTTACACAGCGGG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR78 bp++-
TDFTDR134 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
12822A-C4VGB6C57BL/6NTac
12822A-E7VGB6C57BL/6NTac