Gene | S1pr4 |
Chromosome | 10 |
Deletion Start | 81,499,635 |
Deletion End | 81,498,391 |
Deletion Size | 1,245 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 10
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 81,499,324 | 81,499,342 | CCTGGCCTACGTGGTCAAC |
TUP | 81,499,298 | 81,499,322 | TGCTGCTGTCAGGGACTCGTACCTT |
TUR | 81,499,211 | 81,499,231 | GCCGTGAAGAGCAGACTGAAG |
TDF | 81,498,494 | 81,498,513 | CCGCTGTCCAGCATTTCCAG |
TDP | 81,498,470 | 81,498,491 | TCCGCAGCACCTAGAGCTTGGA |
TDR | 81,498,395 | 81,498,415 | CCATCAGGCAAGGTTCTTGTG |
PCR Primers
Primer | Sequence |
SU | ATCTTGGATGCCAGGCTATG |
SD | GGCTGCTTGTCCCAATGTAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 132 bp | + | + | - |
TDF | TDR | 119 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12827A-A10 | VGB6 | C57BL/6NTac | |
12827A-D2 | VGB6 | C57BL/6NTac | |
12827A-H3 | VGB6 | C57BL/6NTac | |
12827A-E5 | VGB6 | C57BL/6NTac | |