Gene | 4921510H08Rik |
Chromosome | 10 |
Deletion Start | 97,693,480 |
Deletion End | 97,694,711 |
Deletion Size | 1,232 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 10
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 97,693,531 | 97,693,551 | TGGGCATCCTCCATTCCATTG |
TUP | 97,693,554 | 97,693,579 | CACCTGGTCCTCCTACCATCGAAGGC |
TUR | 97,693,647 | 97,693,667 | CGCTGTTGCTTGGGTTGTTTC |
TDF | 97,694,105 | 97,694,124 | AGGCAGCATTGAGGGCACAG |
TDP | 97,694,125 | 97,694,147 | CAAGCCCAGGAGGGTGGCATCTC |
TDR | 97,694,191 | 97,694,211 | CGGCAACTGCGAATCTTCTTC |
PCR Primers
Primer | Sequence |
SU | GGGAGTGGCTCTCACATCTC |
SD | ACATCCACCTTGAGCATGTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 137 bp | + | + | - |
TDF | TDR | 107 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12857A-H6 | VGB6 | C57BL/6NTac | |
12857A-C2 | VGB6 | C57BL/6NTac | |
12857A-E2 | VGB6 | C57BL/6NTac | |
12857A-G10 | VGB6 | C57BL/6NTac | |