Gene | Zfp830 |
Chromosome | 11 |
Deletion Start | 82,764,375 |
Deletion End | 82,765,517 |
Deletion Size | 1,143 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 82,764,861 | 82,764,883 | GGTGGAGAAGAAAGAAGGGACAG |
TUP | 82,764,891 | 82,764,914 | CATCTTCCGGATGCACAGGGCAAA |
TUR | 82,764,915 | 82,764,933 | GAGAGGCAAGCGAGTGTTC |
TDF | 82,765,068 | 82,765,089 | ACCGCCGAAGCATTACCAGAAG |
TDP | 82,765,094 | 82,765,118 | CTTCGACGACCCTGAGGTAGATGCA |
TDR | 82,765,151 | 82,765,170 | CGTCCCACTCTTTGTCCATC |
PCR Primers
Primer | Sequence |
SU | AACCGGGTGTCTAAATGTCG |
SD | AAACAACCTTCCCAAAGCG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 73 bp | + | + | - |
TDF | TDR | 103 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12860A-C8 | VGB6 | C57BL/6NTac | |
12860A-H1 | VGB6 | C57BL/6NTac | |
12860A-G2 | VGB6 | C57BL/6NTac | |