Gene | 2310039H08Rik |
Chromosome | 17 |
Deletion Start | 46,772,816 |
Deletion End | 46,773,202 |
Deletion Size | 387 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 17
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 46,772,926 | 46,772,944 | GGTACAGAAGGGCCAGGAG |
TUP | 46,772,949 | 46,772,971 | CGGGCCTGGAGAAACGCCACATC |
TUR | 46,772,985 | 46,773,003 | AGAGACGCGGTGGGTTCAC |
TDF | 46,773,055 | 46,773,073 | CTGCACCATCGCCCTAGAC |
TDP | 46,773,074 | 46,773,096 | ACGAGGACGCAGCCTCCGACCAT |
TDR | 46,773,166 | 46,773,184 | TCATGCCCTCGGGAAACAC |
PCR Primers
Primer | Sequence |
SU | CGCATCTACACGTGCCAAAG |
SD | TTATGTGGCCAAGCACACTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 78 bp | + | + | - |
TDF | TDR | 130 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12862A-B8 | VGB6 | C57BL/6NTac | |
12862A-D11 | VGB6 | C57BL/6NTac | |