Gene | Gpr87 |
Chromosome | 3 |
Deletion Start | 59,180,082 |
Deletion End | 59,178,934 |
Deletion Size | 1,149 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 3
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 59,180,003 | 59,180,022 | CACACTGCAAACAGCACAAG |
TUP | 59,179,977 | 59,180,002 | TGAGGGACATGGGAAGAACTCTACCC |
TUR | 59,179,936 | 59,179,957 | GTAAAGCACTGGCAGGATGATG |
TDF | 59,179,067 | 59,179,087 | AACCAGGAGCGAAAGCATCAG |
TDP | 59,179,042 | 59,179,064 | CGCTGCAAAGCGTCCGAAGATCA |
TDR | 59,178,993 | 59,179,014 | TGGCCTCTAGTCCTTACACATC |
PCR Primers
Primer | Sequence |
SU | TTCTTTAAATCTTGGCAGCAG |
SD | TCTTAGCCTTGCTCCCTCTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 87 bp | + | + | - |
TDF | TDR | 95 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12911A-A5 | VGB6 | C57BL/6NTac | |
12911A-C5 | VGB6 | C57BL/6NTac | |
12911A-D6 | VGB6 | C57BL/6NTac | |
12911A-G3 | VGB6 | C57BL/6NTac | |