Gene | Mrgprh |
Chromosome | 17 |
Deletion Start | 12,876,878 |
Deletion End | 12,877,907 |
Deletion Size | 1,030 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 17
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 12,877,237 | 12,877,255 | CACGGCCATCAGCGTAGAG |
TUP | 12,877,256 | 12,877,279 | CGGTGCCTCTCCGTGCTTTATCCA |
TUR | 12,877,324 | 12,877,342 | GGCCCACAGCAGCATACAG |
TDF | 12,877,558 | 12,877,579 | CACGGTCATCCTGTTTCTTGTC |
TDP | 12,877,582 | 12,877,606 | CGCCATGCCCATGAAGGTGTTGCTT |
TDR | 12,877,634 | 12,877,658 | GGAGGGAGTCCCATACAGAATCATC |
PCR Primers
Primer | Sequence |
SU | GAGAGCTTTCCCAGAGAGCC |
SD | ACGAAGTGCGACAGTGTTTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 106 bp | + | + | - |
TDF | TDR | 101 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12912A-D3 | VGB6 | C57BL/6NTac | |
12912A-F6 | VGB6 | C57BL/6NTac | |
12912A-F8 | VGB6 | C57BL/6NTac | |
12912A-H10 | VGB6 | C57BL/6NTac | |