12940   Sprr4     Status: ES cell colonies screened / QC positives

GeneSprr4
Chromosome3
Deletion Start92,500,490
Deletion End92,500,261
Deletion Size230
Genome Build38
MGI IDMGI:2654508
NCBI Gene ID229562
BAC ID135L22
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 3

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF92,500,46792,500,490CCTTCCCATCAGCATCAGAATCAG
TUP92,500,44492,500,466CAACAGTGCACACCACAAGCCCA
TUR92,500,38192,500,399GGCACACATGCCTCTTGAC
TDF92,500,32892,500,347AAAACAATGCCCAGCGAGGA
TDP92,500,29492,500,319AACCCAGCTCAAGAGAAGTGTCCTGC
TDR92,500,27092,500,290TGCTTACACTTAGGGTCTTGC

PCR Primers

PrimerSequence
SUAGACGCACACCTTGAATTTG
SDAGAGGCTGGAGCAGTTGAAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR110 bp++-
TDFTDR78 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
12940A-C11VGB6C57BL/6NTac
12940A-B5VGB6C57BL/6NTac
12940A-B11VGB6C57BL/6NTac
12940A-C6VGB6C57BL/6NTac