Gene | 7420426K07Rik |
Chromosome | 9 |
Deletion Start | 98,903,287 |
Deletion End | 98,903,946 |
Deletion Size | 660 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 9
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 98,903,439 | 98,903,457 | CCCACTTGGGTCTGCTGTC |
TUP | 98,903,459 | 98,903,486 | TGGACATGTGCTGGAAACTCATACGCAG |
TUR | 98,903,502 | 98,903,522 | CTGTCTCTTACCGGAGCACTG |
TDF | 98,903,653 | 98,903,674 | TCTCCTGTTGCTGAGAGTTGTG |
TDP | 98,903,676 | 98,903,698 | TCCGTGGTTCACCTGGAGTCTCA |
TDR | 98,903,717 | 98,903,737 | GCAGAGGTGAGTCTGGAAGAG |
PCR Primers
Primer | Sequence |
SU | TCTGAAACCCAGATGTTCCC |
SD | TTCAGGGCTGAACCATCTTC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 84 bp | + | + | - |
TDF | TDR | 85 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
12963A-A11 | VGB6 | C57BL/6NTac | |
12963A-E1 | VGB6 | C57BL/6NTac | |
12963A-F5 | VGB6 | C57BL/6NTac | |
12963A-F6 | VGB6 | C57BL/6NTac | |