12987   D17H6S53E     Status: ES cell colonies screened / QC positives

GeneD17H6S53E
Chromosome17
Deletion Start35,127,118
Deletion End35,128,005
Deletion Size888
Genome Build38
MGI IDMGI:90673
NCBI Gene ID114585
BAC ID371C22
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 17

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF35,127,38135,127,398CCTCAAGCGGGACAAGAC
TUP35,127,39935,127,425TGCCTCTACCATTCAAGAGCCTGCAAG
TUR35,127,46935,127,487TCACGCCACCTGAATCCAC
TDF35,127,71135,127,729GCCACTCCGAGCCATCTTG
TDP35,127,73235,127,754TGCTTTGGGCCTTCGAGGACCTG
TDR35,127,78235,127,801ATGTAGGGCGGCCAGGAAAC

PCR Primers

PrimerSequence
SUCAATGGAACACCACCTCTCC
SDGTCCGTTCTCCACGGTTG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR107 bp++-
TDFTDR91 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
12987A-A7VGB6C57BL/6NTac
12987A-A10VGB6C57BL/6NTac
12987A-E8VGB6C57BL/6NTac
12987A-D2VGB6C57BL/6NTac