13051 Col10a1 Status: ES cell clone microinjected
| Gene | Col10a1 |
| Chromosome | 10 |
| Deletion Start | 34,110,431 |
| Deletion End | 34,115,918 |
| Deletion Size | 5,488 |
| Genome Build | 37 |
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Primer Genomic Coordinates on Chromosome 10
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | | | TGACCCTGGTTCATGGGATG |
| TUP | | | TGCTGAACGGTACCAAACGCCCA |
| TUR | | | GGCGTATGGGATGAAGTATTGTG |
| TDF | | | ACTCCTCTGAGTACGTCCAC |
| TDP | | | TCGTCCTTCTCAGGATTCCTAGTGGC |
| TDR | | | GCGGAGAATAGGATGAGCTTGAC |
PCR Primers
| Primer | Sequence |
| SU | AAGTCATGTCAAAGACTCTGG |
| SD | TTCCTGCATGTTTCCTAGATG |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TCATTCTCAGTATTGTTTTGCC |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | bp | - | + | + |
| NeoFwd | SD | bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 13051A-C2 | VGB6 | C57BL/6NTac | |
| 13051A-C10 | VGB6 | C57BL/6NTac | |
| 13051A-E3 | VGB6 | C57BL/6NTac | |
| 13051A-H9 | VGB6 | C57BL/6NTac | |
