13109   S1pr3     Status: ES cell colonies screened / QC positives

GeneS1pr3
Chromosome13
Deletion Start51,418,788
Deletion End51,420,021
Deletion Size1,234
Genome Build38
MGI IDMGI:1339365
NCBI Gene ID13610
BAC ID368N8
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 13

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF51,419,12351,419,141CCTCAGGGAGGGCAGTATG
TUP51,419,14251,419,162TTCGTAGCCCTGGGCGCATCC
TUR51,419,18551,419,206ATGGTCAGGTGTCGCTCAATGG
TDF51,419,72251,419,741TGTGCGGCTGTCTAGTCAAG
TDP51,419,75151,419,770ACCCAGGCCTCACCCATGCA
TDR51,419,80951,419,829GAGAGTGGCTGCTGTTGTTAC

PCR Primers

PrimerSequence
SUAACGCAGTATTTCCTGGTGC
SDTTTGGACCAATGATGTGTGG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR84 bp++-
TDFTDR108 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
13109A-B2VGB6C57BL/6NTac
13109A-F1VGB6C57BL/6NTac
13109A-G1VGB6C57BL/6NTac
13109A-G3VGB6C57BL/6NTac