13112   Atrn     Status: ES cell colonies screened / QC positives

GeneAtrn
Chromosome2
Deletion Start130,906,564
Deletion End130,935,632
Deletion Size29,069
Genome Build38
MGI IDMGI:1341628
NCBI Gene ID11990
BAC ID231O6
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 2

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF130,907,078130,907,096GCCTCCTGGAGGGATGTTC
TUP130,907,097130,907,120ATTTGGTGGCCTTCGGGTCTGCCT
TUR130,907,130130,907,151GTGTTCCCGTTCCTTCTCAATC
TDF130,934,980130,935,000TGTGGAGTCAGAGGGAGTTAC
TDP130,935,005130,935,031ACACTTGTTGAAATTGCCCAGGCTTCA
TDR130,935,059130,935,077ACAAGCCCTGCCCAGAGTC

PCR Primers

PrimerSequence
SUAGGCGTCCAAAGGGTAACAC
SDGTTCAAGAATGTGAAATGAGTC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR74 bp++-
TDFTDR98 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
13112A-C12VGB6C57BL/6NTac
13112A-D4VGB6C57BL/6NTac
13112A-D7VGB6C57BL/6NTac
13112A-F4VGB6C57BL/6NTac
13112A-H11VGB6C57BL/6NTac