13136   Cox16     Status: ES cell colonies screened / QC positives

GeneCox16
Chromosome12
Deletion Start81,484,962
Deletion End81,472,159
Deletion Size12,804
Genome Build38
MGI IDMGI:1913522
NCBI Gene ID66272
BAC ID414J16
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 12

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF81,484,92081,484,941GCTCTGCGTAAGAACAAGACTC
TUP81,484,89381,484,918ACGCTATGGAGTTCCCATGTTGGTGA
TUR81,484,82481,484,844CAATACGCCACTCAGCCAAAG
TDF81,472,47381,472,492CCTGAGGTTGGCTTGGAGTC
TDP81,472,44081,472,468TGCTGAACTTGTTCTTGAGCCTATTGGGT
TDR81,472,38781,472,408AGCCCAGTGGCTTTGAGTGATG

PCR Primers

PrimerSequence
SUTCGCAGAAGTCAAGATCCAG
SDTGAACAGGTTTCAGAGGCTG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR118 bp++-
TDFTDR106 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
13136A-A10VGB6C57BL/6NTac
13136A-D3VGB6C57BL/6NTac
13136A-F11VGB6C57BL/6NTac
13136A-G12VGB6C57BL/6NTac
13136A-F9VGB6C57BL/6NTac
13136A-G11VGB6C57BL/6NTac