Gene | 6330403K07Rik |
Chromosome | 11 |
Deletion Start | 71,033,399 |
Deletion End | 71,032,986 |
Deletion Size | 414 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 71,033,344 | 71,033,367 | TCCAGAGCAGATGTATTTCGATTC |
TUP | 71,033,320 | 71,033,343 | TGACCCTGAGTACGAGGGCCTGTT |
TUR | 71,033,258 | 71,033,278 | CAGCCGAGGATGCAGACTTAG |
TDF | 71,033,160 | 71,033,180 | CCAGAGCCCAAGGAAGAAGAG |
TDP | 71,033,135 | 71,033,158 | CTCCAGTGGAAGAGGGCTGCTACC |
TDR | 71,033,093 | 71,033,112 | TGGCCGCGTAGATGAAGATG |
PCR Primers
Primer | Sequence |
SU | GAGATAGACTTTGCTGCGCC |
SD | CAGAAGGCTGGACTCTGCTC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 110 bp | + | + | - |
TDF | TDR | 88 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
13167E-D12 | VGB6 | C57BL/6NTac | |