13171   0610007L01Rik     Status: ES cell colonies screened / QC positives

Gene0610007L01Rik
Chromosome5
Deletion Start130,705,341
Deletion End130,717,205
Deletion Size11,865
Genome Build37
MGI IDMGI:1918917
NCBI Gene ID71667
BAC ID453A10
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 5

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF130,705,670130,705,689TGCTGGGATTATGCGTTGTG
TUP130,705,693130,705,722CACCACATCTGGACTGTTCTTTCTGAGACA
TUR130,705,730130,705,748AGGGCAGCTTGGGCTTCAG
TDF130,716,503130,716,523CACAGAAGTCATGCAGCAGAG
TDP130,716,525130,716,553ACCTATCAGGGCCAACTAACTAGTGGCTA
TDR130,716,555130,716,578CACTGTACTAACCAAGCCACATCC

PCR Primers

PrimerSequence
SUTTCTAGTCTTCCAAATGAGCTC
SDAAGAACCACAGCAAACCTCG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR79 bp++-
TDFTDR76 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
13171A-C5VGB6C57BL/6NTac
13171A-H6VGB6C57BL/6NTac
13171A-B11VGB6C57BL/6NTac
13171A-G4VGB6C57BL/6NTac