13172   Gpc2     Status: ES cell colonies screened / QC positives

GeneGpc2
Chromosome5
Deletion Start138,279,811
Deletion End138,274,221
Deletion Size5,591
Genome Build38
MGI IDMGI:1919201
NCBI Gene ID71951
BAC ID223G15
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 5

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF138,278,979138,278,998GGTGAGCACCTTCAAGTCTG
TUP138,278,953138,278,977CCTCAGGAGTACACCTGCTGTTCCA
TUR138,278,895138,278,913TCTACCAGGCCACGGAATG
TDF138,274,426138,274,447CTTGGAGTGAGAGGAGGAAGTG
TDP138,274,400138,274,423AGTGCCAGATACAACCAGGGCCGA
TDR138,274,363138,274,383GGGTATGGAGGCCAACAGATG

PCR Primers

PrimerSequence
SUTGCAATTGGCTCAGTTTCAC
SDCAGGTTCTACCCTCCTTCCTG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR104 bp++-
TDFTDR85 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
13172A-C7VGB6C57BL/6NTac
13172A-C12VGB6C57BL/6NTac
13172A-A7VGB6C57BL/6NTac