13217   BC004004     Status: ES cell colonies screened / QC positives

GeneBC004004
Chromosome17
Deletion Start29,282,082
Deletion End29,301,538
Deletion Size19,457
Genome Build38
MGI IDMGI:2136782
NCBI Gene ID80748
BAC ID127H17
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 17

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF29,282,74629,282,763ACCCGAGCCAGTGCTTTC
TUP29,282,76729,282,788AGCGAACAGCTGGCGCTCACTC
TUR29,282,78929,282,809CACCAGCCGAATGTGATGAAC
TDF29,301,24129,301,258TTCGGAGAGCCCAGAGAC
TDP29,301,26129,301,285TCAGAGTAAGAGCAGCCAGACAGCA
TDR29,301,32129,301,343CAGCAACAGGAAAGCAATGAATG

PCR Primers

PrimerSequence
SUTGGATACAGTGGCCTGTCTG
SDACAGAATCAGGACCCACTGC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR64 bp++-
TDFTDR103 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
13217A-F6VGB6C57BL/6NTac
13217A-H10VGB6C57BL/6NTac