Gene | Dhrs9 |
Chromosome | 2 |
Deletion Start | 69,392,913 |
Deletion End | 69,401,489 |
Deletion Size | 8,577 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 69,393,415 | 69,393,434 | AGGGATGTGCCCAGATAGAC |
TUP | 69,393,438 | 69,393,462 | CCTTGAGTCCCAGCAGGTGGATCTA |
TUR | 69,393,463 | 69,393,483 | TCAGGACCTTTATGCCTGTTC |
TDF | 69,401,302 | 69,401,325 | GACCACGCTCTAACAAGTCTCTTC |
TDP | 69,401,326 | 69,401,350 | CCCAAGACTCGGTACATTGCTGGGA |
TDR | 69,401,363 | 69,401,386 | TGTGAGACAGAGGTATCCAGAATG |
PCR Primers
Primer | Sequence |
SU | GATGGATGAGTTTGCGTGTG |
SD | GGGCAGGTAGCAGCACAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 69 bp | + | + | - |
TDF | TDR | 85 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
13240A-A1 | VGB6 | C57BL/6NTac | |
13240A-A2 | VGB6 | C57BL/6NTac | |
13240A-D2 | VGB6 | C57BL/6NTac | |
13240A-F11 | VGB6 | C57BL/6NTac | |
13240A-D10 | VGB6 | C57BL/6NTac | |
13240A-F3 | VGB6 | C57BL/6NTac | |