Gene | Adora1 |
Chromosome | 1 |
Deletion Start | 134,234,352 |
Deletion End | 134,202,865 |
Deletion Size | 31,488 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 1
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 134,234,251 | 134,234,272 | ACTGGTGATTTGGGCTGTGAAG |
TUP | 134,234,227 | 134,234,249 | TGAACCAGGCACTTCGCGATGCT |
TUR | 134,234,198 | 134,234,218 | ACCGCCAGGGATACGATGAAG |
TDF | 134,203,448 | 134,203,465 | GGATAGCCAACGGCAGTG |
TDP | 134,203,415 | 134,203,441 | AGCCCGTGATCAAGTGTGAGTTCGAGA |
TDR | 134,203,367 | 134,203,391 | CCCAGACGAAGAAGTTGAAGTAGAC |
PCR Primers
Primer | Sequence |
SU | CAGTGGTGGAGTGAGTGCTG |
SD | CCCTGTCTGACTGAAGGAGC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 75 bp | + | + | - |
TDF | TDR | 99 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
13326A-B9 | VGB6 | C57BL/6NTac | |
13326A-D6 | VGB6 | C57BL/6NTac | |
13326A-D11 | VGB6 | C57BL/6NTac | |
13326A-G1 | VGB6 | C57BL/6NTac | |
13326A-G7 | VGB6 | C57BL/6NTac | |