Gene | Siglec1 |
Chromosome | 2 |
Deletion Start | 131,086,095 |
Deletion End | 131,069,799 |
Deletion Size | 16,297 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 131,085,738 | 131,085,759 | CCTGCTCATTCCCTGCATCTTC |
TUP | 131,085,711 | 131,085,735 | CTACCCTGCCGATGTCCCAGTGTCC |
TUR | 131,085,667 | 131,085,687 | CGCTTGCCCGAGTAGTCATAG |
TDF | 131,070,085 | 131,070,106 | CAGGTCTGAGCTTGTCTGATTC |
TDP | 131,070,058 | 131,070,083 | TGTCACCTAGGCAGGAATGAAAGGCC |
TDR | 131,070,026 | 131,070,048 | TGCAGGAGAGGATACATTAGGAG |
PCR Primers
Primer | Sequence |
SU | CCGACTTGTAGCTGGAGAGG |
SD | AATCAAAGGCAACACTTGGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 93 bp | + | + | - |
TDF | TDR | 81 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
13329A-E11 | VGB6 | C57BL/6NTac | |
13329A-H1 | VGB6 | C57BL/6NTac | |
13329A-F12 | VGB6 | C57BL/6NTac | |
13329A-F6 | VGB6 | C57BL/6NTac | |
13329A-H12 | VGB6 | C57BL/6NTac | |
13329A-G2 | VGB6 | C57BL/6NTac | |