13338 Lox Status: ES cell colonies screened / QC no positives
Gene | Lox |
Chromosome | 18 |
Deletion Start | 52,529,326 |
Deletion End | 52,519,203 |
Deletion Size | 10,124 |
Genome Build | 38 |
|
MGI ID | MGI:96817 |
NCBI Gene ID | 0 |
BAC ID | 134I15 |
BAC Library | bMQ |
Cassette | ZEN-Ub1 |
Clones Available | No
|
|
Primer Genomic Coordinates on Chromosome 18
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 52,528,427 | 52,528,446 | GGGCGAAAGGTGACAAACAG |
TUP | 52,528,393 | 52,528,422 | AGGAGTCAGAGGTCATCAGCTTGTCTTATC |
TUR | 52,528,341 | 52,528,362 | CGTGGAAGCCTGGATGTAGTAG |
TDF | 52,519,782 | 52,519,803 | GCTTTCTCCTCACAGACCTTTC |
TDP | 52,519,744 | 52,519,770 | TTGCACCCAAATGGATTCTTCCTTGCA |
TDR | 52,519,695 | 52,519,719 | AGGAACAGAGACAGAAGTAGGTATC |
PCR Primers
Primer | Sequence |
SU | CGGCTTGTGTAACTGCAAAC |
SD | ATCCGTTCAAATTGTGGCTC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 106 bp | + | + | - |
TDF | TDR | 109 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |