13352   Abt1     Status: ES cell colonies screened / QC positives

GeneAbt1
Chromosome13
Deletion Start23,423,829
Deletion End23,421,969
Deletion Size1,861
Genome Build38
MGI IDMGI:1353636
NCBI Gene ID30946
BAC ID447G19
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 13

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF23,423,62023,423,638CAACCTGCTCAGCGCCTAC
TUP23,423,57923,423,602TTTCTTCCAGGCCGAGGGTAAGCC
TUR23,423,55123,423,571CGCATCGTCACCTCTCCTTTC
TDF23,422,62123,422,643CAGGAGGAAAGAAGGGAGCTAAG
TDP23,422,59323,422,618CAGCAAGGACTATACCGAAGGCTGGG
TDR23,422,57123,422,590ACACGCTTGTCTCGGAACTC

PCR Primers

PrimerSequence
SUACCAGGGTACGCTCTTGATG
SDAGCCTTCCACCACAGTGAAC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR88 bp++-
TDFTDR73 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
13352A-B5VGB6C57BL/6NTac
13352A-B12VGB6C57BL/6NTac