13369   Apom     Status: ES cell colonies screened / QC positives

GeneApom
Chromosome17
Deletion Start35,131,720
Deletion End35,129,064
Deletion Size2,657
Genome Build38
MGI IDMGI:1930124
NCBI Gene ID55938
BAC ID307L3
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 17

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF35,130,85135,130,874CTGAAGGGAAAGGAAACATGGAAC
TUP35,130,82535,130,850TCAGAACTGAAGGTTGGTTCCCACCA
TUR35,130,78935,130,808GGGAAACGGCTAAGGGAGAC
TDF35,129,99235,130,013GGCCAAAGGCAGACATTATCAG
TDP35,129,95635,129,984ACACTGACCCCTCTAATTCTTATGGGCTA
TDR35,129,92335,129,945CCTAACTGCACATGAGTCCTTCT

PCR Primers

PrimerSequence
SUAATTCCAGACTTGCCCAGTG
SDGTGGGAGCCAGAAGAAACAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR86 bp++-
TDFTDR91 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
13369A-A3VGB6C57BL/6NTac
13369A-G7VGB6C57BL/6NTac
13369A-B5VGB6C57BL/6NTac
13369A-B4VGB6C57BL/6NTac
13369A-A6VGB6C57BL/6NTac
13369A-B6VGB6C57BL/6NTac