Gene | Chrm4 |
Chromosome | 2 |
Deletion Start | 91,927,252 |
Deletion End | 91,928,781 |
Deletion Size | 1,530 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 91,927,274 | 91,927,292 | GCAGCTCAGCCAATCAGTC |
TUP | 91,927,293 | 91,927,313 | TGTGCGCCTGGTCACAACAGC |
TUR | 91,927,336 | 91,927,356 | TGTCGCAATGAACACCATCTC |
TDF | 91,928,465 | 91,928,483 | TGCTGGCCTTCATCCTCAC |
TDP | 91,928,485 | 91,928,511 | TGGACACCCTACAATGTCATGGTCCTG |
TDR | 91,928,542 | 91,928,561 | CCGATGGACCACACCCTTTC |
PCR Primers
Primer | Sequence |
SU | GCAAGCACCAAGTTCTCTCC |
SD | TACATGCAAGGGAGAGGAGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 83 bp | + | + | - |
TDF | TDR | 97 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
13427A-H11 | VGB6 | C57BL/6NTac | |
13427A-A3 | VGB6 | C57BL/6NTac | |
13427A-B3 | VGB6 | C57BL/6NTac | |
13427A-F3 | VGB6 | C57BL/6NTac | |
13427A-F8 | VGB6 | C57BL/6NTac | |
13427A-H3 | VGB6 | C57BL/6NTac | |