13428   Ckb     Status: ES cell colonies screened / QC no positives

GeneCkb
Chromosome12
Deletion Start111,671,955
Deletion End111,669,502
Deletion Size2,454
Genome Build38
MGI IDMGI:88407
NCBI Gene ID12709
BAC ID384N10
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableNo

Primer Genomic Coordinates on Chromosome 12

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF111,671,050111,671,071CCTGTCCTTGAACTCTGCACTC
TUP111,671,023111,671,047CAGCTCTGTCCAGCCTAGATGGCGA
TUR111,670,979111,670,998CCGCCTCAGTCATGCTCTTG
TDF111,670,436111,670,456AGCTGCCTTCCTCCACTGTTG
TDP111,670,406111,670,429TTGGCGTCTTGGTGACAGCTCACA
TDR111,670,309111,670,327TGGAGTCCCTGCCAGAATG

PCR Primers

PrimerSequence
SUTGCAAGCACAGGCATCCATCG
SDAGATGACACAGAAGGCCAGC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR93 bp++-
TDFTDR148 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++