13436   Commd4     Status: ES cell colonies screened / QC positives

GeneCommd4
Chromosome9
Deletion Start57,158,271
Deletion End57,155,185
Deletion Size3,087
Genome Build38
MGI IDMGI:1913449
NCBI Gene ID66199
BAC ID112E3
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 9

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF57,157,70057,157,723GAAGCGGAGGCAGAGAAAGAATAG
TUP57,157,67357,157,697TCAGACAAGAAACAGCCGTGCAGTC
TUR57,157,63357,157,654GACAGGATGTGGCACTCTCAAG
TDF57,155,29857,155,319GCTCCTTACCACTCTCCTTCAC
TDP57,155,26457,155,288CCCTGCAGAACTGAAGCAAGCCCAG
TDR57,155,23857,155,258TCTCAGCCCAAAGCAGTCATC

PCR Primers

PrimerSequence
SUAAGAAGGAAACCGTGGAACC
SDGCAAGACCCATACACATTGC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR91 bp++-
TDFTDR82 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
13436A-E2VGB6C57BL/6NTac
13436B-D3VGB6C57BL/6NTac