Gene | Creb3l4 |
Chromosome | 3 |
Deletion Start | 90,242,829 |
Deletion End | 90,237,720 |
Deletion Size | 5,110 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 3
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 90,241,982 | 90,242,001 | GCCCTCCGATTCGCATAGAC |
TUP | 90,241,958 | 90,241,979 | ATCCTGCCTAGGGTCAGCACCA |
TUR | 90,241,912 | 90,241,931 | TGGTTGGCGTCGAGACTTAC |
TDF | 90,238,564 | 90,238,583 | CCAAGCCTGCTCTGCTTCTC |
TDP | 90,238,536 | 90,238,560 | ACTCCCTAGAGTGGCGGCCTGTTCG |
TDR | 90,238,499 | 90,238,520 | GCTCCTGGACCTTTCTCTGTAG |
PCR Primers
Primer | Sequence |
SU | TTACTCCCAGATGCAGGTCC |
SD | TGCCCATATGTTATGGATTCAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 90 bp | + | + | - |
TDF | TDR | 85 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
13443A-B3 | VGB6 | C57BL/6NTac | |
13443A-C5 | VGB6 | C57BL/6NTac | |
13443A-H10 | VGB6 | C57BL/6NTac | |
13443A-G10 | VGB6 | C57BL/6NTac | |
13443A-E12 | VGB6 | C57BL/6NTac | |
13443A-G11 | VGB6 | C57BL/6NTac | |